Ummm, ok, this is I think I got it #34 or so...... In the wiring loom coming from the grommit in the trans tunnel behind the gear selector the wires split to go to two connectors, one set of wires had mainly blue wires, one had mainly orange wires. The one with the blue wires ran to a black connector (10 in, 10 out) and the orange went to a white connector.
Coming into the black connector was a wire with very loose black stuff around it (sticky like electrical/friction tape, but no seems like on a shrink wrap). Other than the VERY LOOSE sticky black stuff the wire (silver metal) had no insulation on it, just bare metal strands. The wire metal was exposed for maybe 1/8 inch back from the connector. I fiddled with the wire examining it, put the key in, started the truck and had no warning lights. Comparing one side of wires to the other side of wires I deduced that the unknown bare wire mated to the plain black (no stripe) wire on the other end. So a cut here and a cut there and the two wires now are off of the connector and now have their own connector on the side and I have had no warning lights yet. (15 minutes)
If the pattern continues the lights will come back after awhile. I'll keep posting to let anyone bored enough to find this post know what happens with the damned lights/code.
Dan